Authors:  Pau Badia-i-Mompel et al. (paper link). Type: TF-TG, phosphoproteomics

Authors: Alvarez, Mariano J., et al. (paper link) Type: TF-TG

Authors: Balwierz, Piotr J., et al. (paper link) Type: RNAseq

Authors: Dugourd, Aurelien, et al. (paper link) Type: multi-omics

Authors: Bradley G. and Barrett S.J. (paper link) Type: SIF

Authors: Liu, Anika, et al. (paper link) Type: PKN, TF-TG, DEG

Authors: Schubert, Michael, et al. (paper link) Type: PKN, DEG

Authors: Martignetti, Loredana, et al. (paper link) Type: TF-TG

Authors: Nguyen, Nga Thi Thuy, et al. (paper link) Type: RNAseq

Authors: Sarkans, Ugis, et al. (paper link) Type: gene expression data

Authors: Barretina, Jordi, et al. (paper link) Type: cell line data

Authors: Abugessaisa, Imad, et al. (paper link) Type: RNA annotations and CRMs

Authors: Kulakovskiy, Ivan V., et al.. (paper link) Type: transcription factor binding models

Authors: Del Toro, Noemi, et al. (paper link) Type: Molecular interaction database

Authors: Kanehisa, Minoru et al. (paper link) Type: database of genes and genomes

Authors: Shazman, Shula, et al. (paper link) Type: Drosophila melanogaster TF database

Authors: Jassal, Bijay, et al. (paper link) Type: pathway database

Authors: Fazekas, Dávid, et al. (paper link) Type: signaling pathways

Authors: Essaghir A. Demoulin J-B.  (paper link) Type: annotated TF-TG database

Author: Han, Heonjong, et al. (paper link) Type: transcriptional regulatory networks database

Author: Papatheodorou, Irene, et al. (paper link) Type: gene expression data

Authors: Lovering R.C. et al.  (paper link) Type: DNA binding TF catalogue

Authors: Barrett T, and Edgar R. (paper link) Type: gene expression data

Authors: Abramov, Boytsov et al.. (paper link) Type: human TF allele-specific binding

Authors: Baitaluk, M. et al. (paper link) Type: search engine based on the Semantic Web technologies

Authors: The Wistar Institute. (paper link) Type: gene promoters database

Authors: Lesurf, R. et al. (paper link) Type: curated regulatory annotation database

Authors:  Gallo, S.M. et al. (paper link) Type: Regulatory element database for Drosophila 

Authors: Licata, L. et al. (paper link) Type: Causal networks database

Authors: Chawla, K. et al. (paper link) Type: TF list lookup database

Authors: Teixeira, M.C. et al (paper link) Type: Saccharomyces cerevisiae TF database

Authors: Holmås, S. et al. (paper link) Type: RDF, tfact2gene graph

Authors: Garcia-Alonso, L. et al. (paper link) Type: TF-TG resource

Authors: Huang, T. et al. (paper link) Type: TF-TG resource

Authors: Bovolenta, L.A. et al. (paper link) Type: Human TF regulation interaction database

Authors: Janky, R. et al. (paper link) Type: TF-target subnetworks

Authors: Dass, G. et al. (paper link) Type: omics data lookup

Authors: Portales-Casamar, E. et al. (paper link) Type: TF and regulatory sequence database

Authors: Santos-Zavaleta, A. et al, (paper link) Type: gene regulation in Escherichia coli K-12

Authors: Tomczak, K. et al. (paper link) Type: Cancer genomics datasets and database

Authors: Wingender, E. et al. (paper link) Type: classification of eukaryotic TFs

Authors: Sarkans, U. et al. (paper link) Type: gene expression data

Authors: Vazquez M et al. (paper link) Type: TF-TG datasets

Authors: Huntley, R.P. (paper link) Type: GO annotation database

Authors: Zhang, J. et al. (paper link) Type: Cancer genomics data sets

Authors: Fornes, O. et al. (paper link) Type: eukaryote TF binding profiles

Authors: Türei, D et al. (paper link) Type: database of causal interactions

Authors: Zhang, J. et al. (paper link) Type: protein identification database

Authors: Hammal, F. et al. (paper link) Type: regulatory regions database

Authors: Schmeier, S. (paper link) Type: transcription co-factors and TF database

Authors: Wingender, E. et al. (paper link) Type: eukaryotic TF databases